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A4GNT alpha-1,4-N-acetylglucosaminyltransferase [ Serinus canaria (Common canary) ]

Gene ID: 103815671, updated on 12-Aug-2024

Summary

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Gene symbol
A4GNT
Gene description
alpha-1,4-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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See A4GNT in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 9 NC_066323.1 (19996555..19999350)

Chromosome 9 - NC_066323.1Genomic Context describing neighboring genes Neighboring gene EPH receptor B1 Neighboring gene uncharacterized LOC108961887 Neighboring gene claudin 18 Neighboring gene uncharacterized LOC127059917

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066323.1 Chromosome 9 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066323.1 Reference serCan2020 Primary Assembly

    Range
    19996555..19999350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030227354.1 → XP_030083214.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A8C9MRA5
    Conserved Domains (2) summary
    pfam04572
    Location:254 → 374
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:117 → 231
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
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