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PLCB2 phospholipase C beta 2 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103809295, updated on 11-Mar-2024

Summary

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Gene symbol
PLCB2
Gene description
phospholipase C beta 2
Locus tag
N310_04541
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta
Orthologs
human mouse all
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Genomic context

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See PLCB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008691106.1 (71767..108563, complement)

NW_008691106.1Genomic Context describing neighboring genes Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase B Neighboring gene p21 (RAC1) activated kinase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008691106.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008691106.1 Reference ASM69581v1

    Range
    71767..108563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009082124.1 → XP_009080372.1  LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

    Conserved Domains (10) summary
    cd00275
    Location:678 → 797
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08624
    Location:308 → 644
    PI-PLCc_beta2; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2
    PLN02222
    Location:216 → 795
    PLN02222; phosphoinositide phospholipase C 2
    cd13361
    Location:17 → 141
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    pfam06631
    Location:890 → 922
    DUF1154; Protein of unknown function (DUF1154)
    pfam07321
    Location:891 → 1036
    YscO; Type III secretion protein YscO
    pfam08703
    Location:977 → 1152
    PLC-beta_C; PLC-beta C terminal
    pfam09279
    Location:217 → 308
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    pfam16566
    Location:1062 → 1144
    CREPT; Cell-cycle alteration and expression-elevated protein in tumour
    cl23720
    Location:973 → 1093
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

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