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AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103807259, updated on 3-Aug-2024

Summary

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Gene symbol
AGPAT1
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 1
Locus tag
N310_09784
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See AGPAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008686077.1 (14570..17866)

NW_008686077.1Genomic Context describing neighboring genes Neighboring gene vasoactive intestinal polypeptide receptor 1-like Neighboring gene proline-rich protein 29-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008686077.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008686077.1 Reference ASM69581v1

    Range
    14570..17866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009079981.1 → XP_009078229.1  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    UniProtKB/TrEMBL
    A0A091P2F4
    Conserved Domains (2) summary
    cd07989
    Location:69 → 245
    LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
    COG0204
    Location:28 → 267
    PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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