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Ipo11 importin 11 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103752496, updated on 11-Mar-2024

Summary

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Gene symbol
Ipo11
Gene description
importin 11
See related
Ensembl:ENSNGAG00000007024
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Ipo11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008331125.1 (3156187..3388905, complement)

NW_008331125.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L18 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene leucine rich repeat containing 70 Neighboring gene transmembrane protein 69 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene spermine synthase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008331125 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008331125.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3156187..3388905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008856308.2 → XP_008854530.1  importin-11 isoform X3

    UniProtKB/TrEMBL
    A0A8C6QL92, A0A8C6QN03
    Related
    ENSNGAP00000005107.1, ENSNGAT00000008652.1
    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_029557873.1 → XP_029413733.1  importin-11 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QL92, A0A8C6QLN3
    Related
    ENSNGAP00000005092.1, ENSNGAT00000008623.1
    Conserved Domains (2) summary
    COG5657
    Location:10 → 981
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  3. XM_029557874.1 → XP_029413734.1  importin-11 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QL92
    Conserved Domains (2) summary
    COG5657
    Location:10 → 981
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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