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Fktn fukutin [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103751267, updated on 11-Mar-2024

Summary

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Gene symbol
Fktn
Gene description
fukutin
See related
Ensembl:ENSNGAG00000003096
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Fktn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008356473.1 (5153548..5213915, complement)

NW_008356473.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 38B Neighboring gene TAL bHLH transcription factor 2 Neighboring gene fibronectin type III and SPRY domain containing 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008356473 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fukutin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008356473.1 Reference S.galili_v1.0 Primary Assembly

    Range
    5153548..5213915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008854658.3 → XP_008852880.1  fukutin isoform X4

    UniProtKB/TrEMBL
    A0A8C6QEV5
    Related
    ENSNGAP00000002988.1, ENSNGAT00000003946.1
    Conserved Domains (1) summary
    cl01378
    Location:290 → 327
    LicD; LicD family

  2. XM_029556945.1 → XP_029412805.1  fukutin isoform X3

    Conserved Domains (1) summary
    cl01378
    Location:303 → 340
    LicD; LicD family

  3. XM_029556944.1 → XP_029412804.1  fukutin isoform X2

    Conserved Domains (1) summary
    cl01378
    Location:322 → 359
    LicD; LicD family

  4. XM_029556946.1 → XP_029412806.1  fukutin isoform X5

    Conserved Domains (1) summary
    cl01378
    Location:323 → 360
    LicD; LicD family

  5. XM_029556943.1 → XP_029412803.1  fukutin isoform X1

    Conserved Domains (1) summary
    cl01378
    Location:323 → 360
    LicD; LicD family
Nucleotide Protein
Heading Accession and Version

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