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Rps23 ribosomal protein S23 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103750260, updated on 11-Mar-2024

Summary

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Gene symbol
Rps23
Gene description
ribosomal protein S23
See related
Ensembl:ENSNGAG00000006354
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Rps23 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008355775.1 (3130409..3132268)

NW_008355775.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1 like Neighboring gene 60S ribosomal protein L10-like Neighboring gene autophagy related 10 Neighboring gene actin, cytoplasmic 1-like Neighboring gene uncharacterized LOC115067702

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008355775 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008355775.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3130409..3132268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008853297.3 → XP_008851519.1  40S ribosomal protein S23

    See identical proteins and their annotated locations for XP_008851519.1

    UniProtKB/TrEMBL
    A0A8C6QKS6, A0A8C6RVQ2
    Related
    ENSNGAP00000004686.1, ENSNGAT00000007735.1
    Conserved Domains (1) summary
    PTZ00067
    Location:1 → 143
    PTZ00067; 40S ribosomal S23; Provisional
Nucleotide Protein
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