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St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103750114, updated on 11-Mar-2024

Summary

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Gene symbol
St6gal1
Gene description
ST6 beta-galactoside alpha-2,6-sialyltransferase 1
See related
Ensembl:ENSNGAG00000016295
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See St6gal1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008330926.1 (158195..295998)

NW_008330926.1Genomic Context describing neighboring genes Neighboring gene actin-related protein 2/3 complex subunit 4 pseudogene Neighboring gene adiponectin, C1Q and collagen domain containing Neighboring gene receptor transporter protein 1 Neighboring gene MBL associated serine protease 1 Neighboring gene uncharacterized LOC103750154

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008330926 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactoside alpha-2,6-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008330926.1 Reference S.galili_v1.0 Primary Assembly

    Range
    158195..295998
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008853073.3 → XP_008851295.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_008851295.1

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_029556411.1 → XP_029412271.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_029556429.1 → XP_029412289.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_017803496.2 → XP_017658985.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_017803489.2 → XP_017658978.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_017803495.2 → XP_017658984.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_029556433.1 → XP_029412293.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 174
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  8. XM_029556440.1 → XP_029412300.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 174
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  9. XM_029556413.1 → XP_029412273.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Related
    ENSNGAP00000015192.1, ENSNGAT00000020794.1
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  10. XM_029556409.1 → XP_029412269.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:194 → 399
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  11. XM_029556432.1 → XP_029412292.1  beta-galactoside alpha-2,6-sialyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R8S3
    Conserved Domains (1) summary
    pfam00777
    Location:175 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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