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St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103746466, updated on 11-Mar-2024

Summary

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Gene symbol
St6galnac3
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
See related
Ensembl:ENSNGAG00000006973
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See St6galnac3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008351693.1 (1849842..2416784, complement)

NW_008351693.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene zinc finger protein RFP pseudogene Neighboring gene 60S ribosomal protein L13-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008351693 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008351693.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1849842..2416784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008848657.2 → XP_008846879.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

    UniProtKB/TrEMBL
    A0A8C6QJK8
    Related
    ENSNGAP00000005017.1, ENSNGAT00000008466.1
    Conserved Domains (1) summary
    pfam00777
    Location:70 → 297
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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