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Nop16 NOP16 nucleolar protein [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103745400, updated on 11-Mar-2024

Summary

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Gene symbol
Nop16
Gene description
NOP16 nucleolar protein
See related
Ensembl:ENSNGAG00000018045
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Nop16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008350126.1 (697403..703071)

NW_008350126.1Genomic Context describing neighboring genes Neighboring gene clathrin light chain B Neighboring gene HIG1 hypoxia inducible domain family member 2A Neighboring gene ARF like GTPase 10 Neighboring gene small nuclear ribonucleoprotein E pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008350126 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008350126.1 Reference S.galili_v1.0 Primary Assembly

    Range
    697403..703071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008847325.3 → XP_008845547.1  nucleolar protein 16

    UniProtKB/TrEMBL
    A0A8C6RG07, A0A8C6RG73
    Related
    ENSNGAP00000017694.1, ENSNGAT00000023327.1
    Conserved Domains (1) summary
    pfam09420
    Location:3 → 153
    Nop16; Ribosome biogenesis protein Nop16
Nucleotide Protein
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Gene LinkOut

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