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Dnase1 deoxyribonuclease 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103744421, updated on 11-Mar-2024

Summary

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Gene symbol
Dnase1
Gene description
deoxyribonuclease 1
See related
Ensembl:ENSNGAG00000022187
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dnase1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008330333.1 (1773047..1797693)

NW_008330333.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase inhibitor 2 pseudogene Neighboring gene clusterin associated protein 1 Neighboring gene NLR family CARD domain containing 3 Neighboring gene SLX4 structure-specific endonuclease subunit Neighboring gene TNF receptor associated protein 1 Neighboring gene CREB binding protein Neighboring gene adenylate cyclase 9 Neighboring gene small nucleolar RNA SNORA67

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008330333 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribonuclease-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008330333.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1773047..1797693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029570156.1 → XP_029426016.1  deoxyribonuclease-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I

  2. XM_029570167.1 → XP_029426027.1  deoxyribonuclease-1 isoform X2

    Conserved Domains (1) summary
    smart00476
    Location:10 → 267
    DNaseIc; deoxyribonuclease I

  3. XM_029570150.1 → XP_029426010.1  deoxyribonuclease-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I

  4. XM_029570159.1 → XP_029426019.1  deoxyribonuclease-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I

  5. XM_008846171.3 → XP_008844393.1  deoxyribonuclease-1 isoform X1

    See identical proteins and their annotated locations for XP_008844393.1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I

  6. XM_029570164.1 → XP_029426024.1  deoxyribonuclease-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Related
    ENSNGAP00000023708.1, ENSNGAT00000029408.1
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I

  7. XM_008846161.3 → XP_008844383.1  deoxyribonuclease-1 isoform X1

    See identical proteins and their annotated locations for XP_008844383.1

    UniProtKB/TrEMBL
    A0A8C6RVR8
    Conserved Domains (1) summary
    smart00476
    Location:10 → 282
    DNaseIc; deoxyribonuclease I
Nucleotide Protein
Heading Accession and Version

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