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Ddx31 DEAD-box helicase 31 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103742840, updated on 11-Mar-2024

Summary

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Gene symbol
Ddx31
Gene description
DEAD-box helicase 31
See related
Ensembl:ENSNGAG00000020928
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Ddx31 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008347322.1 (2176239..2246014)

NW_008347322.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103742837 Neighboring gene adenylate kinase 8 Neighboring gene general transcription factor IIIC subunit 4 Neighboring gene BarH like homeobox 1 Neighboring gene cilia and flagella associated protein 77 Neighboring gene transcription termination factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008347322 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX31

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008347322.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2176239..2246014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008843955.3 → XP_008842177.1  probable ATP-dependent RNA helicase DDX31

    UniProtKB/TrEMBL
    A0A8C6RUU4
    Related
    ENSNGAP00000021863.1, ENSNGAT00000027545.1
    Conserved Domains (3) summary
    COG0513
    Location:125 → 613
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17949
    Location:137 → 340
    DEADc_DDX31; DEAD-box helicase domain of DEAD box protein 31
    pfam13959
    Location:584 → 645
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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