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Dhx40 DEAH-box helicase 40 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103741766, updated on 11-Mar-2024

Summary

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Gene symbol
Dhx40
Gene description
DEAH-box helicase 40
See related
Ensembl:ENSNGAG00000014507
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dhx40 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008346261.1 (2133473..2189153, complement)

NW_008346261.1Genomic Context describing neighboring genes Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene clathrin heavy chain Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene yippee like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008346261 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DHX40

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008346261.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2133473..2189153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017800512.2 → XP_017656001.1  probable ATP-dependent RNA helicase DHX40

    UniProtKB/TrEMBL
    A0A8C6R3B9
    Related
    ENSNGAP00000012765.1, ENSNGAT00000018331.1
    Conserved Domains (1) summary
    COG1643
    Location:51 → 750
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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