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Xpo6 exportin 6 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103740922, updated on 11-Mar-2024

Summary

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Gene symbol
Xpo6
Gene description
exportin 6
See related
Ensembl:ENSNGAG00000012740
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Xpo6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008329714.1 (158220..293751)

NW_008329714.1Genomic Context describing neighboring genes Neighboring gene keratinocyte-associated protein 2 pseudogene Neighboring gene SH3 domain binding kinase 1 Neighboring gene metallothionein-1 pseudogene Neighboring gene U1 spliceosomal RNA Neighboring gene GSG1 like Neighboring gene small nucleolar RNA SNORA4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008329714 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exportin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008329714.1 Reference S.galili_v1.0 Primary Assembly

    Range
    158220..293751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008841609.3 → XP_008839831.1  exportin-6 isoform X3

    UniProtKB/TrEMBL
    A0A8C6QZR5
    Related
    ENSNGAP00000010337.1, ENSNGAT00000015865.1
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein

  2. XM_008841619.2 → XP_008839841.1  exportin-6 isoform X4

    UniProtKB/TrEMBL
    A0A8C6QZR5
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein

  3. XM_008841601.3 → XP_008839823.1  exportin-6 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QZR5
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein

  4. XM_008841621.3 → XP_008839843.1  exportin-6 isoform X5

    UniProtKB/TrEMBL
    A0A8C6QZR5
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein

  5. XM_017800271.2 → XP_017655760.1  exportin-6 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QZR5
    Conserved Domains (2) summary
    smart00913
    Location:31 → 96
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:103 → 277
    Xpo1; Exportin 1-like protein
Nucleotide Protein
Heading Accession and Version

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