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Ddx18 DEAD-box helicase 18 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103740721, updated on 11-Mar-2024

Summary

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Gene symbol
Ddx18
Gene description
DEAD-box helicase 18
See related
Ensembl:ENSNGAG00000005624
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Ddx18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008345224.1 (1696145..1711592, complement)

NW_008345224.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene insulin induced gene 2 Neighboring gene coiled-coil domain containing 93 Neighboring gene 5-hydroxytryptamine receptor 5B Neighboring gene 60S ribosomal protein L36a-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008345224 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008345224.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1696145..1711592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008841414.3 → XP_008839636.1  ATP-dependent RNA helicase DDX18

    UniProtKB/TrEMBL
    A0A8C6QJI9
    Related
    ENSNGAP00000004339.1, ENSNGAT00000006932.1
    Conserved Domains (3) summary
    cd18787
    Location:392 → 522
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17942
    Location:182 → 379
    DEADc_DDX18; DEAD-box helicase domain of DEAD box protein 18
    pfam13959
    Location:553 → 611
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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