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Dhx16 DEAH-box helicase 16 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103740570, updated on 11-Mar-2024

Summary

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Gene symbol
Dhx16
Gene description
DEAH-box helicase 16
See related
Ensembl:ENSNGAG00000001106
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dhx16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008344843.1 (158979..172718, complement)

NW_008344843.1Genomic Context describing neighboring genes Neighboring gene alpha tubulin acetyltransferase 1 Neighboring gene chromosome unknown C6orf136 homolog Neighboring gene protein phosphatase 1 regulatory subunit 18 Neighboring gene nurim

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008344843 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008344843.1 Reference S.galili_v1.0 Primary Assembly

    Range
    158979..172718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008841235.2 → XP_008839457.1  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16

    UniProtKB/TrEMBL
    A0A8C6QD56
    Related
    ENSNGAP00000001486.1, ENSNGAT00000001510.1
    Conserved Domains (2) summary
    PTZ00121
    Location:148 → 412
    PTZ00121; MAEBL; Provisional
    COG1643
    Location:372 → 1033
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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