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Dhx29 DExH-box helicase 29 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103739916, updated on 11-Mar-2024

Summary

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Gene symbol
Dhx29
Gene description
DExH-box helicase 29
See related
Ensembl:ENSNGAG00000018322
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dhx29 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008344185.1 (2050170..2104213)

NW_008344185.1Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase 1 Neighboring gene Mtr4 exosome RNA helicase Neighboring gene uncharacterized LOC115071592 Neighboring gene U1 spliceosomal RNA Neighboring gene 60S ribosomal protein L22 pseudogene Neighboring gene cyclin O

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008344185 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX29
Names
DEAH-box helicase 29

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008344185.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2050170..2104213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008840385.2 → XP_008838607.1  ATP-dependent RNA helicase DHX29 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RKT9
    Related
    ENSNGAP00000018128.1, ENSNGAT00000023771.1
    Conserved Domains (1) summary
    COG1643
    Location:546 → 1323
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_029567064.1 → XP_029422924.1  ATP-dependent RNA helicase DHX29 isoform X2

    UniProtKB/TrEMBL
    A0A8C6RKT9
    Conserved Domains (1) summary
    COG1643
    Location:436 → 1213
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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