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Fut9 fucosyltransferase 9 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103739272, updated on 11-Mar-2024

Summary

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Gene symbol
Fut9
Gene description
fucosyltransferase 9
See related
Ensembl:ENSNGAG00000009185
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Fut9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008343387.1 (829488..1093112)

NW_008343387.1Genomic Context describing neighboring genes Neighboring gene mannosidase endo-alpha Neighboring gene farnesyl pyrophosphate synthase pseudogene Neighboring gene uncharacterized LOC103739294 Neighboring gene vascular endothelial growth factor B pseudogene Neighboring gene replication protein A 32 kDa subunit pseudogene Neighboring gene UFM1 specific ligase 1 Neighboring gene four and a half LIM domains 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008343387 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008343387.1 Reference S.galili_v1.0 Primary Assembly

    Range
    829488..1093112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029566712.1 → XP_029422572.1  alpha-(1,3)-fucosyltransferase 9

    UniProtKB/TrEMBL
    A0A8C6QMH9
    Related
    ENSNGAP00000006229.1, ENSNGAT00000011060.1
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_008839599.2 → XP_008837821.1  alpha-(1,3)-fucosyltransferase 9

    See identical proteins and their annotated locations for XP_008837821.1

    UniProtKB/TrEMBL
    A0A8C6QMH9
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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