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Tdrd12 tudor domain containing 12 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103739159, updated on 11-Mar-2024

Summary

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Gene symbol
Tdrd12
Gene description
tudor domain containing 12
See related
Ensembl:ENSNGAG00000000793
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Tdrd12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008343239.1 (1917614..2000275, complement)

NW_008343239.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 89 Neighboring gene solute carrier family 7 member 9 Neighboring gene transcription initiation factor TFIID subunit 13 pseudogene Neighboring gene nudix hydrolase 19 Neighboring gene regulator of G protein signaling 9 binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008343239 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in germ-line stem cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrotransposon silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ATP-dependent RNA helicase TDRD12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008343239.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1917614..2000275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029566643.1 → XP_029422503.1  putative ATP-dependent RNA helicase TDRD12

    UniProtKB/TrEMBL
    A0A8C6QEV2
    Related
    ENSNGAP00000001092.1, ENSNGAT00000001110.1
    Conserved Domains (3) summary
    COG0513
    Location:423 → 851
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    pfam00567
    Location:3 → 128
    TUDOR; Tudor domain
    cl00175
    Location:1164 → 1268
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
Nucleotide Protein
Heading Accession and Version

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