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Alg12 ALG12 alpha-1,6-mannosyltransferase [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103735462, updated on 11-Mar-2024

Summary

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Gene symbol
Alg12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
Ensembl:ENSNGAG00000018988
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Alg12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008339924.1 (1033998..1067442, complement)

NW_008339924.1Genomic Context describing neighboring genes Neighboring gene palmitoyltransferase ZDHHC7 pseudogene Neighboring gene bromodomain containing 1 Neighboring gene small nucleolar RNA SNORD44 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008339924 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008339924.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1033998..1067442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029564335.1 → XP_029420195.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X3

    Conserved Domains (1) summary
    cl21590
    Location:21 → 407
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_008834717.3 → XP_008832939.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:21 → 407
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_029564336.1 → XP_029420196.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X4

    Conserved Domains (1) summary
    cl21590
    Location:21 → 407
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_008834716.2 → XP_008832938.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C6WAA4
    Related
    ENSNGAP00000019048.1, ENSNGAT00000024706.1
    Conserved Domains (1) summary
    cl21590
    Location:21 → 407
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_029564337.1 → XP_029420197.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X5

    Conserved Domains (1) summary
    cl21590
    Location:21 → 407
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_003849800.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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