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Recql4 RecQ like helicase 4 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103735237, updated on 11-Mar-2024

Summary

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Gene symbol
Recql4
Gene description
RecQ like helicase 4
See related
Ensembl:ENSNGAG00000004346
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Recql4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008339763.1 (418055..424396)

NW_008339763.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C8orf82 homolog Neighboring gene leucine rich repeat containing 24 Neighboring gene leucine rich repeat containing 14 Neighboring gene major facilitator superfamily domain containing 3 Neighboring gene glutamic--pyruvic transaminase Neighboring gene protein phosphatase 1 regulatory subunit 16A Neighboring gene forkhead box H1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008339763 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent DNA helicase Q4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008339763.1 Reference S.galili_v1.0 Primary Assembly

    Range
    418055..424396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029564169.1 → XP_029420029.1  ATP-dependent DNA helicase Q4 isoform X4

    UniProtKB/TrEMBL
    A0A8C6QI98
    Related
    ENSNGAP00000003694.1, ENSNGAT00000005496.1
    Conserved Domains (4) summary
    smart00343
    Location:382 → 397
    ZnF_C2HC; zinc finger
    cd18794
    Location:681 → 825
    SF2_C_RecQ; C-terminal helicase domain of the RecQ family helicases
    cd18018
    Location:473 → 668
    DEXHc_RecQ4-like; DEAH-box helicase domain of RecQ4 and similar proteins
    pfam11719
    Location:7 → 168
    Drc1-Sld2; DNA replication and checkpoint protein

  2. XM_029564166.1 → XP_029420026.1  ATP-dependent DNA helicase Q4 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QI98
    Conserved Domains (3) summary
    smart00343
    Location:470 → 485
    ZnF_C2HC; zinc finger
    cd18794
    Location:769 → 913
    SF2_C_RecQ; C-terminal helicase domain of the RecQ family helicases
    cd18018
    Location:561 → 756
    DEXHc_RecQ4-like; DEAH-box helicase domain of RecQ4 and similar proteins

  3. XM_029564168.1 → XP_029420028.1  ATP-dependent DNA helicase Q4 isoform X3

    UniProtKB/TrEMBL
    A0A8C6QI98
    Conserved Domains (2) summary
    smart00343
    Location:470 → 485
    ZnF_C2HC; zinc finger
    COG0514
    Location:556 → 877
    RecQ; Superfamily II DNA helicase RecQ [Replication, recombination and repair]

  4. XM_029564167.1 → XP_029420027.1  ATP-dependent DNA helicase Q4 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QI98
    Conserved Domains (3) summary
    smart00343
    Location:466 → 481
    ZnF_C2HC; zinc finger
    cd18794
    Location:765 → 909
    SF2_C_RecQ; C-terminal helicase domain of the RecQ family helicases
    cd18018
    Location:557 → 752
    DEXHc_RecQ4-like; DEAH-box helicase domain of RecQ4 and similar proteins

  5. XM_029564170.1 → XP_029420030.1  ATP-dependent DNA helicase Q4 isoform X5

    Conserved Domains (3) summary
    smart00343
    Location:470 → 485
    ZnF_C2HC; zinc finger
    cd18794
    Location:769 → 913
    SF2_C_RecQ; C-terminal helicase domain of the RecQ family helicases
    cd18018
    Location:561 → 756
    DEXHc_RecQ4-like; DEAH-box helicase domain of RecQ4 and similar proteins
Nucleotide Protein
Heading Accession and Version

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