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Rnase6 ribonuclease A family member 6 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103733659, updated on 11-Jul-2024

Summary

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Gene symbol
Rnase6
Gene description
ribonuclease A family member 6
See related
Ensembl:ENSNGAG00000012627
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Rnase6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008337421.1 (521904..531950, complement)

NW_008337421.1Genomic Context describing neighboring genes Neighboring gene ribonuclease A family member 1, pancreatic Neighboring gene small nucleolar RNA SNORA40 Neighboring gene epididymal secretory protein E3-beta Neighboring gene ribonuclease A family member 4 Neighboring gene angiogenin Neighboring gene uncharacterized LOC115070256 Neighboring gene transfer RNA proline (anticodon UGG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008337421 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antibacterial humoral response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to Gram-negative bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease K6
Names
ribonuclease A family member k6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008337421.1 Reference S.galili_v1.0 Primary Assembly

    Range
    521904..531950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017798016.1 → XP_017653505.1  ribonuclease K6 isoform X1

    Conserved Domains (1) summary
    pfam00074
    Location:105 → 223
    RnaseA; Pancreatic ribonuclease

  2. XM_017798017.1 → XP_017653506.1  ribonuclease K6 isoform X2

    UniProtKB/TrEMBL
    A0A8C6W5V3
    Related
    ENSNGAP00000010125.1, ENSNGAT00000015647.1
    Conserved Domains (1) summary
    pfam00074
    Location:30 → 148
    RnaseA; Pancreatic ribonuclease

  3. XM_008832549.2 → XP_008830771.1  ribonuclease K6 isoform X2

    UniProtKB/TrEMBL
    A0A8C6W5V3
    Conserved Domains (1) summary
    pfam00074
    Location:30 → 148
    RnaseA; Pancreatic ribonuclease
Nucleotide Protein
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