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Dhx57 DExH-box helicase 57 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103732802, updated on 11-Mar-2024

Summary

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Gene symbol
Dhx57
Gene description
DExH-box helicase 57
See related
Ensembl:ENSNGAG00000006882
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dhx57 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008336857.1 (31273..126389)

NW_008336857.1Genomic Context describing neighboring genes Neighboring gene MORN repeat containing 2 Neighboring gene gem nuclear organelle associated protein 6 Neighboring gene tetratricopeptide repeat protein 39B-like Neighboring gene serine and arginine rich splicing factor 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008336857 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ATP-dependent RNA helicase DHX57
Names
DEAH-box helicase 57

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008336857.1 Reference S.galili_v1.0 Primary Assembly

    Range
    31273..126389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008831516.3 → XP_008829738.1  putative ATP-dependent RNA helicase DHX57 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QK84, A0A8C6QMQ2
    Related
    ENSNGAP00000004976.1, ENSNGAT00000008377.1
    Conserved Domains (3) summary
    COG1643
    Location:501 → 1376
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd14317
    Location:181 → 218
    UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
    pfam05773
    Location:246 → 419
    RWD; RWD domain

  2. XM_029562739.1 → XP_029418599.1  putative ATP-dependent RNA helicase DHX57 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QK84
    Conserved Domains (3) summary
    COG1643
    Location:501 → 1368
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd14317
    Location:181 → 218
    UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
    pfam05773
    Location:246 → 419
    RWD; RWD domain
Nucleotide Protein
Heading Accession and Version

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