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Ddx10 DEAD-box helicase 10 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103731338, updated on 11-Mar-2024

Summary

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Gene symbol
Ddx10
Gene description
DEAD-box helicase 10
See related
Ensembl:ENSNGAG00000010526
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Ddx10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008334957.1 (3081686..3328931)

NW_008334957.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 7-like Neighboring gene leucine zipper transcription factor-like protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008334957 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008334957.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3081686..3328931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008829716.3 → XP_008827938.1  probable ATP-dependent RNA helicase DDX10

    UniProtKB/TrEMBL
    A0A8C6QQZ9
    Related
    ENSNGAP00000007219.1, ENSNGAT00000012702.1
    Conserved Domains (3) summary
    COG0513
    Location:69 → 472
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17941
    Location:80 → 277
    DEADc_DDX10; DEAD-box helicase domain of DEAD box protein 10
    pfam13959
    Location:451 → 510
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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