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A3galt2 alpha 1,3-galactosyltransferase 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103730905, updated on 11-Mar-2024

Summary

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Gene symbol
A3galt2
Gene description
alpha 1,3-galactosyltransferase 2
See related
Ensembl:ENSNGAG00000019951
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See A3galt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008334092.1 (837331..849916, complement)

NW_008334092.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 62 Neighboring gene zinc finger protein 362 Neighboring gene polyhomeotic homolog 2 Neighboring gene toll-like receptor 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008334092 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008334092.1 Reference S.galili_v1.0 Primary Assembly

    Range
    837331..849916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017797177.2 → XP_017652666.1  alpha-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RN37
    Conserved Domains (1) summary
    cd02515
    Location:67 → 337
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

  2. XM_017797178.2 → XP_017652667.1  alpha-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C6RN37, A0A8C6RPP2
    Related
    ENSNGAP00000020464.1, ENSNGAT00000026132.1
    Conserved Domains (1) summary
    cd02515
    Location:67 → 338
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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