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Chst15 carbohydrate sulfotransferase 15 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103729255, updated on 11-Mar-2024

Summary

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Gene symbol
Chst15
Gene description
carbohydrate sulfotransferase 15
See related
Ensembl:ENSNGAG00000017553
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008332149.1 (46690..143748)

NW_008332149.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene carboxypeptidase X, M14 family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008332149 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008332149.1 Reference S.galili_v1.0 Primary Assembly

    Range
    46690..143748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008827247.3 → XP_008825469.1  carbohydrate sulfotransferase 15

    UniProtKB/TrEMBL
    A0A8C6REH6
    Related
    ENSNGAP00000016997.1, ENSNGAT00000022620.1
    Conserved Domains (1) summary
    cl21551
    Location:253 → 505
    Sulfotransfer_3; Sulfotransferase family

  2. XM_029560714.1 → XP_029416574.1  carbohydrate sulfotransferase 15

    UniProtKB/TrEMBL
    A0A8C6REH6
    Conserved Domains (1) summary
    cl21551
    Location:253 → 505
    Sulfotransfer_3; Sulfotransferase family

RNA

  1. XR_607054.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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