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LOC103728932 beta-1,3-galactosyltransferase 5-like [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103728932, updated on 9-Nov-2023

Summary

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Gene symbol
LOC103728932
Gene description
beta-1,3-galactosyltransferase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
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Genomic context

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See LOC103728932 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008331810.1 (1757161..1816152, complement)

NW_008331810.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-galactosyltransferase 5-like Neighboring gene beta-1,3-galactosyltransferase 5-like Neighboring gene immunoglobulin superfamily member 5 Neighboring gene Purkinje cell protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008331810 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008331810.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1757161..1816152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008826927.1 → XP_008825149.1  beta-1,3-galactosyltransferase 5-like

    Conserved Domains (1) summary
    cl21608
    Location:72 → 249
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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