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Cyth3 cytohesin 3 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103726442, updated on 11-Mar-2024

Summary

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Gene symbol
Cyth3
Gene description
cytohesin 3
See related
Ensembl:ENSNGAG00000019742
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Cyth3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008360015.1 (480512..579470)

NW_008360015.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 220 member A Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 42 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 1 Neighboring gene aminoacyl tRNA synthase complex-interacting multifunctional protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008360015 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytohesin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008360015.1 Reference S.galili_v1.0 Primary Assembly

    Range
    480512..579470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008824006.3 → XP_008822228.1  cytohesin-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C6RLP2, A0A8C6RMH0
    Related
    ENSNGAP00000020205.1, ENSNGAT00000025872.1
    Conserved Domains (2) summary
    cd01252
    Location:263 → 382
    PH_GRP1-like; General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain
    pfam01369
    Location:66 → 248
    Sec7; Sec7 domain

  2. XM_029559116.1 → XP_029414976.1  cytohesin-3 isoform X3

    UniProtKB/TrEMBL
    A0A8C6RMH0
    Conserved Domains (2) summary
    cd01252
    Location:215 → 334
    PH_GRP1-like; General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain
    pfam01369
    Location:18 → 200
    Sec7; Sec7 domain

  3. XM_029559115.1 → XP_029414975.1  cytohesin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RMH0
    Conserved Domains (2) summary
    cd01252
    Location:291 → 410
    PH_GRP1-like; General Receptor for Phosphoinositides-1-like Pleckstrin homology (PH) domain
    pfam01369
    Location:94 → 276
    Sec7; Sec7 domain
Nucleotide Protein
Heading Accession and Version

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