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Inpp5a inositol polyphosphate-5-phosphatase A [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103725829, updated on 11-Mar-2024

Summary

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Gene symbol
Inpp5a
Gene description
inositol polyphosphate-5-phosphatase A
See related
Ensembl:ENSNGAG00000021586
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Inpp5a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008359444.1 (895858..1088018)

NW_008359444.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 27 Neighboring gene PWWP domain containing 2B Neighboring gene U6 spliceosomal RNA Neighboring gene NK6 homeobox 2 Neighboring gene cilia and flagella associated protein 46

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008359444 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type I inositol 1,4,5-trisphosphate 5-phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008359444.1 Reference S.galili_v1.0 Primary Assembly

    Range
    895858..1088018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008823156.2 → XP_008821378.1  type I inositol 1,4,5-trisphosphate 5-phosphatase

    UniProtKB/TrEMBL
    A0A8C6RTV4, A0A8C6RXD2
    Related
    ENSNGAP00000022844.1, ENSNGAT00000028533.1
    Conserved Domains (1) summary
    cd09092
    Location:10 → 394
    INPP5A; Type I inositol polyphosphate 5-phosphatase I
Nucleotide Protein
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