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LOC103716673 conserved oligomeric Golgi complex subunit 5 [ Phoenix dactylifera (date palm) ]

Gene ID: 103716673, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103716673
Gene description
conserved oligomeric Golgi complex subunit 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Phoenix dactylifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Genomic context

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See LOC103716673 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current palm_55x_up_171113_PBpolish2nd_filt_p (GCF_009389715.1) Unplaced Scaffold NW_024067700.1 (272061..281419)
102 previous assembly DPV01 (GCF_000413155.1) Unplaced Scaffold NW_008246743.1 (11168..20529, complement)

NW_024067700.1Genomic Context describing neighboring genes Neighboring gene protein MODIFIER OF SNC1 11-like Neighboring gene 50S ribosomal protein L6, chloroplastic Neighboring gene glucan endo-1,3-beta-glucosidase-like Neighboring gene probable calcium-binding protein CML17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phoenix dactylifera Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

Genomic

  1. NW_024067700.1 Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

    Range
    272061..281419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008804771.4 → XP_008802993.2  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A8B7CNJ8
    Conserved Domains (1) summary
    pfam10392
    Location:50 → 164
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
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