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Elocl1 elongin C like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 103691088, updated on 17-Aug-2024

Summary

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Official Symbol
Elocl1provided by RGD
Official Full Name
elongin C like 1provided by RGD
Primary source
RGD:9368177
See related
EnsemblRapid:ENSRNOG00000061371 AllianceGenome:RGD:9368177
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See Elocl1 in Genome Data Viewer
Location:
12q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (22103409..22104061, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (16989717..16991140, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (19254160..19254590, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L34, pseudogene 3 Neighboring gene zinc finger with KRAB and SCAN domains 1 Neighboring gene zinc finger and SCAN domain containing 21 Neighboring gene NHP2-like protein 1 pseudogene Neighboring gene zinc finger protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
elongin-C-like
Names
transcription elongation factor B polypeptide 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    22103409..22104061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039089868.2 → XP_038945796.1  elongin-C-like

    UniProtKB/TrEMBL
    A0A096MIY6, A0A0G2K2A0
    Related
    ENSRNOP00000072159.1, ENSRNOT00000089349.3
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials