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GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Ursus maritimus (polar bear) ]

Gene ID: 103682379, updated on 11-Mar-2024

Summary

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Gene symbol
GALNT18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
See related
Ensembl:ENSUMAG00000016168
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See GALNT18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024424786.1 (636476..975147, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007929448.1 (389143..559963, complement)

NW_024424786.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene zinc finger BED-type containing 5 Neighboring gene uncharacterized LOC121104745 Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024424786.1 Reference ASM1731132v1 Primary Assembly

    Range
    636476..975147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040638811.1 → XP_040494745.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A452UMI2, A0A8M1GII1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:475 → 566
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_040638810.1 → XP_040494744.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A452UMI2, A0A8M1GT78
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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