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DERA deoxyribose-phosphate aldolase [ Ursus maritimus (polar bear) ]

Gene ID: 103677792, updated on 11-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSUMAG00000002830
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425119.1 (15130110..15243006)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907282.1 (3993020..4107682)

NW_024425119.1Genomic Context describing neighboring genes Neighboring gene EGFR pathway substrate 8, signaling adaptor Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene uncharacterized LOC103677794 Neighboring gene uncharacterized LOC103677795

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425119.1 Reference ASM1731132v1 Primary Assembly

    Range
    15130110..15243006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040642194.1 → XP_040498128.1  deoxyribose-phosphate aldolase isoform X3

    UniProtKB/TrEMBL
    A0A452T6I8, A0A8M1GQZ2
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_040642192.1 → XP_040498126.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    A0A452T6I8, A0A8M1GQY6
    Conserved Domains (1) summary
    cd00959
    Location:57 → 284
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_040642193.1 → XP_040498127.1  deoxyribose-phosphate aldolase isoform X2

    UniProtKB/TrEMBL
    A0A452T6H5, A0A8M1GTL6
    Conserved Domains (1) summary
    cl21457
    Location:57 → 241
    TIM; TIM-like beta/alpha barrel domains
Nucleotide Protein
Heading Accession and Version

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