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COG6 component of oligomeric golgi complex 6 [ Ursus maritimus (polar bear) ]

Gene ID: 103677647, updated on 11-Mar-2024

Summary

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Gene symbol
COG6
Gene description
component of oligomeric golgi complex 6
See related
Ensembl:ENSUMAG00000019445
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423344.1 (18569911..18656499)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907279.1 (24228436..24311544, complement)

NW_024423344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103677649 Neighboring gene LHFPL tetraspan subfamily member 6 Neighboring gene uncharacterized LOC121100208 Neighboring gene uncharacterized LOC103677643

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423344.1 Reference ASM1731132v1 Primary Assembly

    Range
    18569911..18656499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040622288.1 → XP_040478222.1  conserved oligomeric Golgi complex subunit 6 isoform X1

    UniProtKB/TrEMBL
    A0A452UZW7, A0A8M1F8N3
    Conserved Domains (1) summary
    smart01087
    Location:68 → 656
    COG6; Conserved oligomeric complex COG6

  2. XM_040622295.1 → XP_040478229.1  conserved oligomeric Golgi complex subunit 6 isoform X3

    UniProtKB/TrEMBL
    A0A452UZW7, A0A8M1FBR0
    Conserved Domains (1) summary
    smart01087
    Location:68 → 602
    COG6; Conserved oligomeric complex COG6

  3. XM_040622292.1 → XP_040478226.1  conserved oligomeric Golgi complex subunit 6 isoform X2

    UniProtKB/TrEMBL
    A0A452UZW7, A0A8M1F4H1
    Conserved Domains (1) summary
    smart01087
    Location:68 → 653
    COG6; Conserved oligomeric complex COG6

RNA

  1. XR_005832504.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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