U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha [ Ursus maritimus (polar bear) ]

Gene ID: 103677383, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
BCKDHA
Gene description
branched chain keto acid dehydrogenase E1 subunit alpha
See related
Ensembl:ENSUMAG00000005656
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BCKDHA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024424341.1 (51951157..51971150)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907276.1 (78424..97894, complement)

NW_024424341.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 91 Neighboring gene exosome component 5 Neighboring gene uncharacterized LOC121103486 Neighboring gene uncharacterized LOC121103485 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
Names
branched chain keto acid dehydrogenase E1, alpha polypeptide

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024424341.1 Reference ASM1731132v1 Primary Assembly

    Range
    51951157..51971150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040634025.1 → XP_040489959.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A452TH72, A0A8M1GD79
    Conserved Domains (1) summary
    cd02000
    Location:99 → 391
    TPP_E1_PDC_ADC_BCADC; Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain ...

  2. XM_008706641.2 → XP_008704863.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A384DCX2, A0A452TH72
    Related
    ENSUMAP00000007276.1
    Conserved Domains (1) summary
    pfam00676
    Location:107 → 407
    E1_dh; Dehydrogenase E1 component

  3. XM_040634026.1 → XP_040489960.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A452TH72, A0A8M1G566
    Conserved Domains (1) summary
    cd02000
    Location:24 → 316
    TPP_E1_PDC_ADC_BCADC; Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.