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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Ursus maritimus (polar bear) ]

Gene ID: 103673244, updated on 11-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSUMAG00000001918
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024426552.1 (44725770..44785792)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907201.1 (307193..366650)

NW_024426552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103673240 Neighboring gene uncharacterized LOC121100400 Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene uncharacterized LOC103673252 Neighboring gene uncharacterized LOC103673251 Neighboring gene small nucleolar RNA SNORA20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024426552.1 Reference ASM1731132v1 Primary Assembly

    Range
    44725770..44785792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008701972.2 → XP_008700194.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_008700194.1

    UniProtKB/TrEMBL
    A0A384D0B9
    Related
    ENSUMAP00000002125.1
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_040621141.1 → XP_040477075.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A384D0B9
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_040621143.1 → XP_040477077.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8M1F5F4
    Conserved Domains (1) summary
    pfam00777
    Location:51 → 273
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_040621142.1 → XP_040477076.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A384D0B9
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_008701974.2 → XP_008700196.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_008700196.1

    UniProtKB/TrEMBL
    A0A384D0B9
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_008701973.2 → XP_008700195.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_008700195.1

    UniProtKB/TrEMBL
    A0A384D0B9
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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