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TMED5 transmembrane p24 trafficking protein 5 [ Ursus maritimus (polar bear) ]

Gene ID: 103669365, updated on 11-Mar-2024

Summary

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Gene symbol
TMED5
Gene description
transmembrane p24 trafficking protein 5
See related
Ensembl:ENSUMAG00000011101
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See TMED5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423564.1 (27366839..27382161)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907162.1 (10109608..10124924)

NW_024423564.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2-alpha kinase 1-like Neighboring gene down-regulator of transcription 1 Neighboring gene coiled-coil domain containing 18 Neighboring gene metal response element binding transcription factor 2 Neighboring gene small nucleolar RNA SNORD58

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423564.1 Reference ASM1731132v1 Primary Assembly

    Range
    27366839..27382161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040627026.1 → XP_040482960.1  transmembrane emp24 domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A8M1FKX2
    Conserved Domains (1) summary
    pfam01105
    Location:35 → 158
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_008697695.2 → XP_008695917.1  transmembrane emp24 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A384CM53
    Related
    ENSUMAP00000015076.1
    Conserved Domains (1) summary
    pfam01105
    Location:35 → 222
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
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