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LOC103666560 elongation factor 1-alpha, somatic form-like [ Ursus maritimus (polar bear) ]

Gene ID: 103666560, updated on 16-Nov-2023

Summary

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Gene symbol
LOC103666560
Gene description
elongation factor 1-alpha, somatic form-like
See related
Ensembl:ENSUMAG00000013211
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
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Genomic context

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See LOC103666560 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425786.1 (17404806..17416287)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907138.1 (12549328..12560809, complement)

NW_024425786.1Genomic Context describing neighboring genes Neighboring gene inhibitor of DNA binding 3, HLH protein Neighboring gene uncharacterized LOC103666561 Neighboring gene ribosomal protein L11 Neighboring gene elongin A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha, somatic form-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425786.1 Reference ASM1731132v1 Primary Assembly

    Range
    17404806..17416287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008694616.1 → XP_008692838.1  elongation factor 1-alpha, somatic form-like

    UniProtKB/TrEMBL
    A0A384CDA4
    Related
    ENSUMAP00000017993.1, ENSUMAT00000021266.1
    Conserved Domains (4) summary
    PTZ00141
    Location:1 → 461
    PTZ00141; elongation factor 1- alpha; Provisional
    cd01883
    Location:9 → 238
    EF1_alpha; Elongation Factor 1-alpha (EF1-alpha) protein family
    cd03693
    Location:242 → 332
    EF1_alpha_II; Domain II of elongation factor 1-alpha
    cd03705
    Location:336 → 438
    EF1_alpha_III; Domain III of Elongation Factor 1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases