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PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 [ Ursus maritimus (polar bear) ]

Gene ID: 103661475, updated on 11-Mar-2024

Summary

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Gene symbol
PIP4P2
Gene description
phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
See related
Ensembl:ENSUMAG00000015489
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Also known as
TMEM55A
Orthologs
human mouse all
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Genomic context

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See PIP4P2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024427107.1 (37353940..37405741, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907097.1 (11918105..11969685, complement)

NW_024427107.1Genomic Context describing neighboring genes Neighboring gene N-terminal EF-hand calcium binding protein 1 Neighboring gene transfer RNA threonine (anticodon CGU) Neighboring gene chromosome unknown C8orf88 homolog Neighboring gene nudC domain-containing protein 2-like Neighboring gene uncharacterized LOC103661420 Neighboring gene OTU deubiquitinase 6B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase
Names
transmembrane protein 55A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024427107.1 Reference ASM1731132v1 Primary Assembly

    Range
    37353940..37405741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008689181.2 → XP_008687403.2  type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase

    UniProtKB/TrEMBL
    A0A384BXU9, A0A452UJW6
    Conserved Domains (1) summary
    pfam09788
    Location:7 → 250
    Tmemb_55A; Transmembrane protein 55A
Nucleotide Protein
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