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DDX60 DExD/H-box helicase 60 [ Ursus maritimus (polar bear) ]

Gene ID: 103658143, updated on 11-Mar-2024

Summary

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Gene symbol
DDX60
Gene description
DExD/H-box helicase 60
See related
Ensembl:ENSUMAG00000020219
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human all
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Genomic context

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See DDX60 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423453.1 (54849452..54960171, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907058.1 (2462955..2564697, complement)

NW_024423453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103658142 Neighboring gene U6 spliceosomal RNA Neighboring gene protein preY, mitochondrial-like Neighboring gene tubulin alpha chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX60

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423453.1 Reference ASM1731132v1 Primary Assembly

    Range
    54849452..54960171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040626426.1 → XP_040482360.1  probable ATP-dependent RNA helicase DDX60 isoform X2

    UniProtKB/TrEMBL
    A0A452V2Y2, A0A8M1FJ91
    Conserved Domains (2) summary
    COG4581
    Location:702 → 1314
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:703 → 883
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  2. XM_008685617.2 → XP_008683839.2  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A384BNK1, A0A452V351
    Conserved Domains (2) summary
    COG4581
    Location:756 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:757 → 937
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  3. XM_040626425.1 → XP_040482359.1  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A384BNK1, A0A452V351
    Conserved Domains (2) summary
    COG4581
    Location:756 → 1368
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:757 → 937
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60
Nucleotide Protein
Heading Accession and Version

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