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DDX43 DEAD-box helicase 43 [ Ursus maritimus (polar bear) ]

Gene ID: 103657391, updated on 11-Mar-2024

Summary

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Gene symbol
DDX43
Gene description
DEAD-box helicase 43
See related
Ensembl:ENSUMAG00000012291
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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See DDX43 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425452.1 (25762617..25778305)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907051.1 (8730485..8745810)

NW_024425452.1Genomic Context describing neighboring genes Neighboring gene protein FAM32A-like Neighboring gene oocyte expressed protein Neighboring gene sororin-like Neighboring gene cyclic GMP-AMP synthase Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425452.1 Reference ASM1731132v1 Primary Assembly

    Range
    25762617..25778305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008684831.2 → XP_008683053.2  probable ATP-dependent RNA helicase DDX43

    UniProtKB/TrEMBL
    A0A384BKB6, A0A452U7N5
    Conserved Domains (2) summary
    PTZ00110
    Location:171 → 621
    PTZ00110; helicase; Provisional
    cd22430
    Location:69 → 135
    KH-I_DDX43_DDX53; type I K homology (KH) RNA-binding domain found in DEAD box protein 43 (DDX43), DEAD box protein 53 (DDX53) and similar proteins
Nucleotide Protein
Heading Accession and Version

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