U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103645977 xyloglucan endotransglucosylase/hydrolase protein 24 [ Zea mays ]

Gene ID: 103645977, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC103645977
Gene description
xyloglucan endotransglucosylase/hydrolase protein 24
Locus tag
ZEAMMB73_Zm00001d002409
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G091118
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC103645977 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (12337488..12339278, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (12116471..12118261, complement)

Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene probable metal-nicotianamine transporter YSL14 Neighboring gene 10 kDa chaperonin 1, chloroplastic Neighboring gene xyloglucan endotransglucosylase/hydrolase protein 15 Neighboring gene diphosphomevalonate decarboxylase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable xyloglucan endotransglucosylase/hydrolase protein 27; xyloglucan endotransglucosylase/hydrolase protein 24

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    12337488..12339278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020548152.1 → XP_020403741.1  probable xyloglucan endotransglucosylase/hydrolase protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A804MAU6, A0A804MAU7
    Conserved Domains (1) summary
    cl22861
    Location:29 → 166
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  2. XM_008670710.2 → XP_008668932.1  xyloglucan endotransglucosylase/hydrolase protein 24 isoform X2

    See identical proteins and their annotated locations for XP_008668932.1

    UniProtKB/TrEMBL
    A0A1D6E0F4, A0A3L6FWX7
    Conserved Domains (1) summary
    cd02176
    Location:29 → 290
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials