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LOC103641409 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic-like [ Zea mays ]

Gene ID: 103641409, updated on 14-Dec-2023

Summary

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Gene symbol
LOC103641409
Gene description
4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic-like
Locus tag
ZEAMMB73_Zm00001d024891
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G174699
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Genomic context

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See LOC103641409 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 10 NC_050105.1 (94882197..94887985, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 10 NC_024468.2 (93137362..93143083, complement)

Chromosome 10 - NC_050105.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100285397 Neighboring gene probable carbohydrate esterase At4g34215 Neighboring gene uncharacterized LOC109943009 Neighboring gene uncharacterized LOC100275815

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic-like
Names
Beta-glucosidase 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050105.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    94882197..94887985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008664761.3 → XP_008662983.1  4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic-like

    UniProtKB/TrEMBL
    A0A1D6J2J3, A0A3L6G646
    Conserved Domains (1) summary
    cl23725
    Location:69 → 552
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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