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LOC103640860 laccase-25-like [ Zea mays ]

Gene ID: 103640860, updated on 14-Dec-2023

Summary

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Gene symbol
LOC103640860
Gene description
laccase-25-like
Locus tag
ZEAMMB73_Zm00001d023617
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
Laccase-7; GRMZM2G094375
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Genomic context

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See LOC103640860 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 10 NC_050105.1 (12081883..12084751, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 10 NC_024468.2 (12275223..12278091, complement)

Chromosome 10 - NC_050105.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103640859 Neighboring gene uncharacterized LOC100277272 Neighboring gene uncharacterized LOC103642307 Neighboring gene uncharacterized LOC100194014

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-25-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323270.1 → NP_001310199.1  laccase-25-like precursor

    Status: VALIDATED

    Source sequence(s)
    CABHLF010000007, EC889493, EZ096687
    UniProtKB/TrEMBL
    A0A1D6IUF2, A0A3L6G5Q5
    Conserved Domains (1) summary
    cl28276
    Location:31 → 585
    SufI; Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenes

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050105.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    12081883..12084751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials