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LOC103638195 alpha-mannosidase [ Zea mays ]

Gene ID: 103638195, updated on 14-Dec-2023

Summary

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Gene symbol
LOC103638195
Gene description
alpha-mannosidase
Locus tag
ZEAMMB73_Zm00001d030285
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G015143; GRMZM5G855776
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Genomic context

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Location:
chromosome: 1
Exon count:
29
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (119489187..119502351, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (119480820..119493836, complement)

Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene alpha-mannosidase Neighboring gene uncharacterized LOC109943442 Neighboring gene uncharacterized LOC109943671 Neighboring gene uncharacterized LOC118476044

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-mannosidase
Names
putative alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    119489187..119502351 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008661190.4 → XP_008659412.1  alpha-mannosidase

    UniProtKB/TrEMBL
    A0A1D6KBR7, A0A804LPI7
    Conserved Domains (2) summary
    PLN02701
    Location:38 → 1006
    PLN02701; alpha-mannosidase
    cd10810
    Location:39 → 316
    GH38N_AMII_LAM_like; N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38)
Nucleotide Protein
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Molecular Biology Databases
Research Materials