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LOC103632225 acidic endochitinase [ Zea mays ]

Gene ID: 103632225, updated on 14-Dec-2023

Summary

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Gene symbol
LOC103632225
Gene description
acidic endochitinase
Locus tag
ZEAMMB73_Zm00001d019405
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
GRMZM2G130686
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Genomic context

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See LOC103632225 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 7 NC_050102.1 (32194081..32196007, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 7 NC_024465.2 (32449625..32451247, complement)

Chromosome 7 - NC_050102.1Genomic Context describing neighboring genes Neighboring gene protein SUBSTANDARD STARCH GRAIN 4, chloroplastic Neighboring gene uncharacterized LOC103633812 Neighboring gene Protein TIC 22-like chloroplastic Neighboring gene acidic endochitinase Neighboring gene acidic endochitinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acidic endochitinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050102.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    32194081..32196007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008654043.4 → XP_008652265.1  acidic endochitinase

    See identical proteins and their annotated locations for XP_008652265.1

    UniProtKB/TrEMBL
    A0A1D6HXA8, A0A3L6E412
    Conserved Domains (1) summary
    cd02877
    Location:26 → 295
    GH18_hevamine_XipI_class_III; This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that ...
Nucleotide Protein
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Molecular Biology Databases
Research Materials