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LOC103580998 carbohydrate sulfotransferase 11 [ Microplitis demolitor ]

Gene ID: 103580998, updated on 2-Oct-2024

Summary

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Gene symbol
LOC103580998
Gene description
carbohydrate sulfotransferase 11
See related
EnsemblRapid:LOC103580998
Gene type
protein coding
RefSeq status
MODEL
Organism
Microplitis demolitor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Microgastrinae; Microplitis
Orthologs
honey bee all
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Genomic context

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See LOC103580998 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current iyMicDemo2.1a (GCF_026212275.2) 4 NC_068548.1 (20761047..20762990)
101 previous assembly Mdem2 (GCF_000572035.2) Unplaced Scaffold NW_014463870.1 (861761..863694, complement)

Chromosome 4 - NC_068548.1Genomic Context describing neighboring genes Neighboring gene YTH domain containing 1 Neighboring gene Spinophilin Neighboring gene uncharacterized LOC103580994 Neighboring gene Ubiquitin-like activating enzyme 2 Neighboring gene uncharacterized LOC128667611 Neighboring gene kin17 DNA and RNA binding protein Neighboring gene carbohydrate sulfotransferase 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sequencing identifies viral and wasp genes with potential roles in replication of Microplitis demolitor Bracovirus. Burke GR, et al. J Virol, 2012 Mar. PMID 22238295, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212275.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyMicDemo2.1a

Genomic

  1. NC_068548.1 Reference iyMicDemo2.1a

    Range
    20761047..20762990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008562961.2 → XP_008561183.1  carbohydrate sulfotransferase 11

    Related
    XP_008561183.1, XM_008562961.2
    Conserved Domains (1) summary
    cl22970
    Location:124 → 362
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases