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LOC103571850 lactosylceramide 4-alpha-galactosyltransferase [ Microplitis demolitor ]

Gene ID: 103571850, updated on 10-Apr-2024

Summary

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Gene symbol
LOC103571850
Gene description
lactosylceramide 4-alpha-galactosyltransferase
See related
EnsemblRapid:LOC103571850
Gene type
protein coding
RefSeq status
MODEL
Organism
Microplitis demolitor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Microgastrinae; Microplitis
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Genomic context

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See LOC103571850 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current iyMicDemo2.1a (GCF_026212275.2) 10 NC_068554.1 (2307074..2309004)
101 previous assembly Mdem2 (GCF_000572035.2) Unplaced Scaffold NW_014463937.1 (1724824..1726596, complement)

Chromosome 10 - NC_068554.1Genomic Context describing neighboring genes Neighboring gene Cuticular protein 57A Neighboring gene Synaptosomal-associated protein 29kDa Neighboring gene protein phosphatase 2 regulatory subunit tws Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sequencing identifies viral and wasp genes with potential roles in replication of Microplitis demolitor Bracovirus. Burke GR, et al. J Virol, 2012 Mar. PMID 22238295, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
lactosylceramide 4-alpha-galactosyltransferase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212275.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyMicDemo2.1a

Genomic

  1. NC_068554.1 Reference iyMicDemo2.1a

    Range
    2307074..2309004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008550170.2 → XP_008548392.1  lactosylceramide 4-alpha-galactosyltransferase

    See identical proteins and their annotated locations for XP_008548392.1

    Related
    XP_008548392.1, XM_008550170.2
    Conserved Domains (2) summary
    pfam04572
    Location:228 → 350
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:92 → 203
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  2. XM_008550169.2 → XP_008548391.1  lactosylceramide 4-alpha-galactosyltransferase

    See identical proteins and their annotated locations for XP_008548391.1

    Related
    XP_008548391.1, XM_008550169.2
    Conserved Domains (2) summary
    pfam04572
    Location:228 → 350
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:92 → 203
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  3. XM_008550171.2 → XP_008548393.1  lactosylceramide 4-alpha-galactosyltransferase

    See identical proteins and their annotated locations for XP_008548393.1

    Related
    XP_008548393.1, XM_008550171.2
    Conserved Domains (2) summary
    pfam04572
    Location:228 → 350
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:92 → 203
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

  4. XM_014441962.2 → XP_014297448.1  lactosylceramide 4-alpha-galactosyltransferase

    Related
    XP_014297448.1, XM_014441962.2
    Conserved Domains (2) summary
    pfam04572
    Location:228 → 350
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:92 → 203
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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