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LOC103503539 mitochondrial carnitine/acylcarnitine carrier-like protein [ Cucumis melo (muskmelon) ]

Gene ID: 103503539, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103503539
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103503539 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 4 NC_066860.1 (1014807..1016908)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007547663.1 (956756..959003)

Chromosome 4 - NC_066860.1Genomic Context describing neighboring genes Neighboring gene AT-hook motif nuclear-localized protein 13-like Neighboring gene mitochondrial carnitine/acylcarnitine carrier-like protein Neighboring gene mitochondrial carnitine/acylcarnitine carrier-like protein Neighboring gene uncharacterized LOC103503541

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066860.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    1014807..1016908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008467746.3 → XP_008465968.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_008465968.1

    UniProtKB/TrEMBL
    A0A1S3CQ47, A0A5A7T5K6
    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein

  2. XM_008467747.3 → XP_008465969.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_008465969.1

    UniProtKB/TrEMBL
    A0A1S3CQ47, A0A5A7T5K6
    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein

  3. XM_008467748.3 → XP_008465970.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    See identical proteins and their annotated locations for XP_008465970.1

    UniProtKB/TrEMBL
    A0A1S3CQ47, A0A5A7T5K6
    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein

  4. XM_017048023.2 → XP_016903512.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A1S3CQ47, A0A5A7T5K6
    Conserved Domains (1) summary
    pfam00153
    Location:210 → 296
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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