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LOC103502562 uncharacterized LOC103502562 [ Cucumis melo (muskmelon) ]

Gene ID: 103502562, updated on 6-Jun-2024

Summary

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Gene symbol
LOC103502562
Gene description
uncharacterized LOC103502562
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103502562 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
22
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 10 NC_066866.1 (28215040..28225625, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546361.1 (697515..708085, complement)

Chromosome 10 - NC_066866.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127151142 Neighboring gene uncharacterized LOC103502561 Neighboring gene phosphomannomutase Neighboring gene uncharacterized LOC127151143

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC103502562

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066866.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    28215040..28225625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051090552.1 → XP_050946509.1  uncharacterized protein LOC103502562 isoform X3

    UniProtKB/TrEMBL
    A0A1S3CM69

  2. XM_051090553.1 → XP_050946510.1  uncharacterized protein LOC103502562 isoform X3

    UniProtKB/TrEMBL
    A0A1S3CM69

  3. XM_051090551.1 → XP_050946508.1  uncharacterized protein LOC103502562 isoform X1

    UniProtKB/TrEMBL
    A0A9I9DZV1

  4. XM_008466531.3 → XP_008464753.1  uncharacterized protein LOC103502562 isoform X2

    UniProtKB/TrEMBL
    A0A1S3CMC1, A0A5A7VAV6
    Conserved Domains (2) summary
    pfam04685
    Location:532 → 894
    DUF608; Protein of unknown function, DUF608
    pfam12215
    Location:111 → 399
    GBA2_N; beta-Glucocerebrosidase 2 N terminal

  5. XM_051090554.1 → XP_050946511.1  uncharacterized protein LOC103502562 isoform X3

    UniProtKB/TrEMBL
    A0A1S3CM69
Nucleotide Protein
Heading Accession and Version

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