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LOC103502333 callose synthase 10 [ Cucumis melo (muskmelon) ]

Gene ID: 103502333, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103502333
Gene description
callose synthase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103502333 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
52
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 2 NC_066858.1 (25721720..25754744, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546356.1 (398520..431516)

Chromosome 2 - NC_066858.1Genomic Context describing neighboring genes Neighboring gene protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 Neighboring gene F-box/LRR-repeat protein At3g26922-like Neighboring gene U6 spliceosomal RNA Neighboring gene probable phosphopantothenoylcysteine decarboxylase Neighboring gene adenine/guanine permease AZG2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066858.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    25721720..25754744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008466233.3 → XP_008464455.1  callose synthase 10

    See identical proteins and their annotated locations for XP_008464455.1

    UniProtKB/TrEMBL
    A0A1S3CLY1, A0A5A7UWE1
    Conserved Domains (2) summary
    pfam02364
    Location:1029 → 1767
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:349 → 458
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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